1999
Taylor, III, Joseph E.. Making Salmon: an Environmental History of the Northwest Fisheries Crisis. Seattle: University of Washington Press, 1999.
Oregon Aquatic Habitat: Restoration and Enhancement Guide. [Corvallis, Or.]: Oregon Plan for Salmon and Watersheds , 1999.
Conway, Flaxen D. L., Sheila Cordray, Lori Cramer, Carmel Finley, Jennifer Gilden, Ginny Goblirsch, Court Smith, and Oregon State University. Sea Grant College Program,. Oregon’s changing coastal fishing communities In ORESU-O. Vol. no.ORESU-O-99-001. Corvallis, Or.: Oregon State University. Oregon Sea Grant, 1999.
Johnson, Orlay W., Mary H. Ruckelshaus, Stewart W. Grant, William F. Waknitz, Ann M. Garrett, Gregory J. Bryant, Kathleen Neely, Jeffrey J. Hard, and Northwest Fisheries Science Center(U.S.). Status review of coastal cutthroat trout from Washington, Oregon, and California In NOAA Technical Memorandum NMFS-NWFSC. [Seattle, Wash.]: Northwest Fisheries Science Center, 1999.
Rodgers, J. D.. Summary of Habitat and Salmonid Populations in the Lobster Creek Sub-Basin (Alsea) 1998-99 In Progress Reports / Fish Division, Oregon Department of Fish and Wildlife. Portland, Or.: Oregon Dept. of Fish and Wildlife, 1999.
Boese, Bruce L., Robert J. Ozretich, Janet O. Lamberson, Richard C. Swartz, Faith A. Cole, Judith Pelletier, and Jill K. P. Jones. "Toxicity and phototoxicity of mixtures of highly lipophilic PAH compounds in marine sediment: Can the PAH model be extrapolated?" Archives of Environmental Contamination and Toxicology 36 (1999): 270-280.
Brophy, Laura, Oregon. Governor's Watershed Enhancement Board, and MidCoast Watersheds Council.. Yaquina and Alsea River Basins Estuarine Wetland Site Prioritization Project: Final Report for MidCoast Watersheds Council. Corvallis, OR: Green Point Consulting, 1999.
2000
Good, James W.. "3.3 Summary and current status of Oregon's estuarine ecosystems." In Oregon State of the Environment Report 2000, 12 p. Salem, Or.: Oregon Progress Board, 2000.
Castillo, Gonzalo C.. Benthic Biological Invasions in Two Temperate Estuaries and Their Effects on Trophic Relations of Native Fish and Community Stability. Ph. D. ed. Corvallis, Or.: Oregon State University, 2000.
Solazzi, M. F., T. E. Nickelson, Steven L. Johnson, and J. D. Rodgers. "Effects of increasing winter rearing habitat on abundance of salmonids in two coastal Oregon streams." Canadian Journal of Fisheries and Aquatic Sciences 57 (2000): 906-914.
Finley, Carmel. Fish Tales: Salmon Stories, 1945-1980. M.A.I.S. ed. Corvallis, Or.: Oregon State University, 2000.
Emmett, Robert L., Roberto Llansó, Jan Newton, Ron Thom, Michelle Hornberger, Cheryl Morgan, Colin Levings, Andrea Copping, and Paul Fishman. "Geographic signatures of North American West Coast estuaries." Estuaries and Coasts 23 (2000): p.765-792.
Haynes, Amy. North Fork Alsea & South Fork Alsea Watershed Analyses: Riparian Reserve Treatment Recommendations Update. Salem, Or.: Marys Peak Resource Area, Salem District, Bureau of Land Management, 2000.
Oregon Coastal Atlas. Oregon Ocean-Coastal Management Program, 2000.
Perkins, Thaïs Erbel. The Spatial Distribution of Beaver (Castor canadensis) Impoundments and Effects on Plant Community Structure in the Lower Alsea Drainage of the Oregon Coast Range. M.S. ed. Corvallis, Or.: Oregon State University, 2000.
Oregon Plan for Salmon and Watersheds, and Oregon. Dept. of Fish and Wildlife. Coastal Salmonid Inventory Project. Status of Oregon coastal stocks of anadromous salmonids, 1998-1999 / The Oregon Plan for Salmon and Watersheds. In Oregon Plan for Salmon and Watersheds Monitoring Report . Vol. no. 2000-3. Portland, Or.: Oregon Dept. of Fish and Wildlife, 2000.
2001
Yamada, Sylvia Behrens, Office of Sea Grant and Extramural Programs., and Oregon State University Sea Grant College Program.. Global invader: the European green crab In ORESU-B. Vol. no.01-001. Corvallis, Or.: Oregon Sea Grant, Oregon State University , 2001.
Prothero, Donald R., Clio Z. Bitboul, George W. Moore, Alan R. Niem, American Association of Petroleum Geologists. Pacific Section, and Geological Society of America. Cordilleran Section. "Magnetic stratigraphy and tectonic rotation of the Oligocene Alsea, Yaquina, and Nye Formations, Lincoln County, Oregon." In Magnetic stratigraphy of the Pacific Coast Cenozoic : a symposium volume based on Proceedings of the 1997 Pacific Section AAPG-SEPM Meeting, Bakersfield, California, and the 2001 Pacific Section AAPG-SEPM-Cordilleran Section GSA Meeting, p.184-194. Vol. 91. Book (SEPM (Society for Sedimentary Geology). Pacific Section) 91. Fullerton, CA: Pacific Section SEPM, 2001.
Garono, Ralph, Laura Brophy, and Midcoast Watersheds Council. Midcoast Sixth Field Watershed Assessment: Final Report. Newport, Or.: Midcoast Watersheds Council, 2001.
Losey, Robert J.. "Oral tradition of earthquakes and tsunamis on the central Cascadia coast: variation of accounts and relations to historically observed patterns across the Northwest coast." In Changing Landscapes : "Telling Our Stories" : Poceedings of the Fourth Annual Coquille Cultural Preservation Conference, 2000, p.3-15. North Bend, Or: Coquille Tribe of Oregon, 2001.
Lindsay, Robert B., Ken R. Kenaston, and Kirk R. Schroeder. Reducing Impacts of Hatchery Steelhead Programs In Information Reports / Fish Division, Oregon Department of Fish and Wildlife. Vol. no.2001-01. Portland, Or.: Oregon Dept. of Fish and Wildlife, Fish Division, 2001.
Oregon Plan for Salmon and Watersheds, and Oregon. Dept. of Fish and Wildlife. Coastal Salmonid Inventory Project. Status of Oregon coastal stocks of anadromous salmonids, 1999-2000 / The Oregon Plan for Salmon and Watersheds. In Oregon Plan for Salmon and Watersheds Monitoring Report . Vol. no. OPSW-ODFW-2001-3 . Portland, Or.: Oregon Dept. of Fish and Wildlife, 2001.
2002
Zybach, Bob. "The Alseya Valley Prairie Complex, ca. 1850: native landscapes in western GLO surveys." In Changing Landscapes : Sustaining Traditions: Proceedings of the 5th and 6th Annual Coquille Cultural Preservation Conferences, edited by Donald B. Ivy and Scott R. Byram, p.161-188. North Bend, Or.: Coquille Tribe of Oregon, 2002.
Byram, Robert Scott. Brush Fences and Basket Traps: the Archaeology and Ethnohistory of Tidewater Weir Fishing on the Oregon Coast. Ph. D. ed. Eugene, Or.: University of Oregon, 2002.
Kostow, Kathryn Eileen. Oregon lampreys: natural history, status and analysis of management issues In Information Reports (Oregon. Fish Division). [Portland, Or.]: Oregon Dept. of Fish and Wildlife, 2002.

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